A probabilistic atlas of 7 sub-thalamic regions, segmented according to their white-matter connectivity to cortical areas, kindly provided by Heidi Johansen-Berg and Timothy Behrens, FMRIB.
This connectivity atlas reports probability of anatomical connection from points in the thalamus to each of 7 cortical zones. These probabilities are calculated using probabilistic diffusion tractography in multiple subjects.
This package is part of FSL.
Related packages:
fsl-5.0-doc-wiki, fsl-atlases, fsl-bangor-cerebellar-atlas, fsl-first-data, fsl-harvard-oxford-atlases, fsl-harvard-oxford-cortical-lateralized-atlas, fsl-jhu-dti-whitematter-atlas, fsl-juelich-histological-atlas, fsl-mni-structural-atlas, fsl-mni152-templates, fsl-oxford-striatal-atlas, fsl-possum-data, fsl-resting-connectivity-parcellation-atlases, fsl-subthalamic-nucleus-atlas, fsl-talairach-daemon-atlas
Additional information
-
Rahul S. Desikan, Florent Ségonne, Bruce Fischl, Brian T. Quinn, Bradford C. Dickerson, Deborah Blacker, Randy L. Buckner, Anders M. Dale, R. Paul Maguire, Bradley T. Hyman, Marilyn S. Albert, Ronald J. Killiany (2006).
An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest. Neuroimage, 31, 968–980.
URL
DOI
PubMed
-
Simon B Eickhoff, Klaas E Stephan, Hartmut Mohlberg, Christian Grefkes, Gereon R Fink, Katrin Amunts, Karl Zilles (2005).
A new SPM toolbox for combining probabilistic cytoarchitectonic maps and functional imaging data. Neuroimage, 25, 1325–1335.
URL
DOI
PubMed
-
Kegang Hua, Jiangyang Zhang, Setsu Wakana, Hangyi Jiang, Xin Li, Daniel S Reich, Peter A Calabresi, James J Pekar, Peter C M van Zijl, Susumu Mori (2008).
Tract probability maps in stereotaxic spaces: analyses of white matter anatomy and tract-specific quantification. Neuroimage, 39, 336–347.
URL
DOI
PubMed
-
J Mazziotta, A Toga, A Evans, P Fox, J Lancaster, K Zilles, R Woods, T Paus, G Simpson, B Pike, C Holmes, L Collins, P Thompson, D MacDonald, M Iacoboni, T Schormann, K Amunts, N Palomero-Gallagher, S Geyer, L Parsons, K Narr, N Kabani, G Le Goualher, D Boomsma, T Cannon, R Kawashima, and B Mazoyer (2001).
A probabilistic atlas and reference system for the human brain: International Consortium for Brain Mapping (ICBM). The Royal Society Philosophical Transactions B, 356, 1293–1322.
URL
DOI
-
Jack L. Lancaster, Marty G. Woldorff, Lawrence M. Parsons, Mario Liotti, Catarina S. Freitas, Lacy Rainey, Peter V. Kochunov, Dan Nickerson, Shawn A. Mikiten, Peter T. Fox (2000).
Automated Talairach atlas labels for functional brain mapping. Human Brain Mapping, 10, 120–131.
URL
DOI
PubMed
-
TEJ Behrens, H. Johansen-Berg, MW Woolrich, SM Smith, CAM Wheeler-Kingshott, PA Boulby, GJ Barker, EL Sillery, K. Sheehan, O. Ciccarelli , AJ Thompson, JM Brady, PM Matthews (2003).
Non-invasive mapping of connections between human thalamus and cortex using diffusion imaging. Nature Neuroscience, 6, 750–757.
URL
DOI
PubMed
-
Jörn Diedrichsen, Joshua H Balsters, Jonathan Flavell, Emma Cussans, Narender Ramnani (2009).
A probabilistic MR atlas of the human cerebellum. Neuroimage, 46, 39-46.
URL
DOI
PubMed