Packages for Ubuntu 10.04 LTS “Lucid Lynx” (lucid)

Source Binary Description
afni
afni toolkit for analyzing and visualizing functional MRI data
afni-common miscellaneous scripts and data files for AFNI
afni-dbg debug symbols for AFNI
afni-dev header and static libraries for AFNI plugin development
ants
ants advanced normalization tools for brain and image analysis
arno-iptables-firewall
arno-iptables-firewall single- and multi-homed firewall script with DSL/ADSL support
autotools-dev
autotools-dev Update infrastructure for config.{guess,sub} files
biosig4c++
biosig-tools format conversion tools for biomedical data formats
libbiosig-dev I/O library for biomedical data - development files
libbiosig1 I/O library for biomedical data - dynamic library
libbiosig1-dbg I/O library for biomedical data - debug symbols
octave-biosig Octave bindings for BioSig library
python-biosig Python bindings for BioSig library
brian
python-brian simulator for spiking neural networks
python-brian-doc simulator for spiking neural networks - documentation
python-brian-lib simulator for spiking neural networks -- extensions
caret
caret Computerized Anatomical Reconstruction and Editing Toolkit
cctools
coop-computing-tools cooperative computing tools
coop-computing-tools-dev libraries and header files for coop-computing-tools
coop-computing-tools-doc documentation for coop-computing-tools
python-workqueue cooperative computing tools work queue Python bindings
cde
cde package everything required to execute a Linux command on another computer
cmtk
cmtk Computational Morphometry Toolkit
connectomeviewer
connectomeviewer Interactive Analysis and Visualization for MR Connectomics
cython
cython C-Extensions for Python
cython-dbg C-Extensions for Python (Debug Build of Cython)
debian-handbook
debian-handbook reference book for Debian users and system administrators
debruijn
debruijn De Bruijn cycle generator
dh-autoreconf
dh-autoreconf debhelper add-on to call autoreconf and clean up after the build
dicomnifti
dicomnifti converts DICOM files into the NIfTI format
dipy
python-dipy toolbox for analysis of MR diffusion imaging data
python-dipy-doc toolbox for analysis of MR diffusion imaging data -- documentation
python-dipy-lib toolbox for analysis of MR diffusion imaging data -- extensions
dmtcp
dmtcp Checkpoint/Restart functionality for Linux processes
dmtcp-dbg Debug package for dmtcp
drawtk
libdrawtk-dev Library to simple and efficient 2D drawings (development files)
libdrawtk0 Library to simple and efficient 2D drawings
libdrawtk0-dbg Library to simple and efficient 2D drawings (debugging symbols)
edac-utils
edac-utils report kernel-detected PCI and ECC RAM errors
libedac-dev report kernel-detected PCI and ECC RAM errors
libedac1 report kernel-detected PCI and ECC RAM errors
libedac1-dbg report kernel-detected PCI and ECC RAM errors
eegdev
eegdev-plugins-free Biosignal acquisition device library (free plugins)
libeegdev-dev Biosignal acquisition device library (Developement files)
libeegdev0 Biosignal acquisition device library
libeegdev0-dbg Biosignal acquisition device library (Debugging symbols)
eeglab11
eeglab11-sampledata sample EEG data for EEGLAB tutorials
matlab-eeglab11 electrophysiological data analysis
eegview
eegview Software to display EEG data in realtime
eigen3
libeigen3-dev lightweight C++ template library for linear algebra
libeigen3-doc eigen3 API docmentation
fail2ban
fail2ban ban hosts that cause multiple authentication errors
freeipmi
freeipmi GNU implementation of the IPMI protocol
freeipmi-bmc-watchdog GNU implementation of the IPMI protocol - BMC watchdog
freeipmi-common GNU implementation of the IPMI protocol - common files
freeipmi-ipmidetect GNU IPMI - IPMI node detection tool
freeipmi-ipmiseld GNU IPMI - IPMI node detection tool
freeipmi-tools GNU implementation of the IPMI protocol - tools
libfreeipmi-dev GNU IPMI - development package
libfreeipmi16 GNU IPMI - libraries
libipmiconsole-dev GNU IPMI - ipmiconsole development package
libipmiconsole2 GNU IPMI - Serial-over-Lan library
libipmidetect-dev GNU IPMI - ipmidetect development package
libipmidetect0 GNU IPMI - IPMI node detection library
libipmimonitoring-dev GNU IPMI - ipmimonitoring development package
libipmimonitoring5a GNU IPMI - Sensor monitoring library
fsl
fsl-5.0-core analysis tools for FMRI, MRI and DTI brain imaging
fsl-core metapackage for the latest version of FSL
fslmeta
fsl-5.0-complete metapackage for the entire FSL suite (tools and data)
fsl-complete metapackage for the entire FSL suite (tools and data)
fslview
fslview viewer for (f)MRI and DTI data
fslview-doc Documentation for FSLView
gifticlib
gifti-bin tools shipped with the GIFTI library
libgiftiio-dev IO library for the GIFTI cortical surface data format
libgiftiio0 IO library for the GIFTI cortical surface data format
git-annex
git-annex-standalone manage files with git, without checking their contents into git -- standalone build
glew
glew-utils OpenGL Extension Wrangler - utilities
libglew1.9 OpenGL Extension Wrangler - runtime environment
libglew1.9-dbg OpenGL Extension Wrangler (debugging symbols)
libglew1.9-dev OpenGL Extension Wrangler - development environment
libglewmx1.9 OpenGL Extension Wrangler (Multiple Rendering Contexts)
libglewmx1.9-dbg OpenGL Extension Wrangler MX (debugging symbols)
libglewmx1.9-dev OpenGL Extension Wrangler MX - development environment
gmsl
gmsl extra functions to extend functionality of GNU Makefiles
guacamole-client
guacamole HTML5 web application for accessing remote desktops
guacamole-tomcat Tomcat-based Guacamole install with VNC support
guacamole-server
guacd Guacamole proxy daemon
libguac-client-rdp0 RDP support plugin for Guacamole
libguac-client-ssh0 SSH support plugin for Guacamole
libguac-client-vnc0 VNC support plugin for Guacamole
libguac-dev Development headers for the core Guacamole library
libguac5 Core Guacamole library used by guacd and client plugins
incf-nidash-oneclick
incf-nidash-oneclick-clients utility for pushing DICOM data to the INCF datasharing server
isis
isis-utils utilities for the ISIS neuroimaging data I/O framework
libisis-core-dev I/O framework for neuroimaging data
libisis-core0 I/O framework for neuroimaging data
libisis-ioplugins-common data format plugins for the ISIS framework
libisis-ioplugins-dicom dicom io plugin for the ISIS framework
libisis-qt4-0 Qt4 bindings for ISIS data I/O framework
libisis-qt4-dev Qt4 bindings for ISIS data I/O framework (development headers)
python-isis Python bindings for ISIS data I/O framework (development headers)
itksnap
itksnap semi-automatic segmentation of structures in 3D images
jist
jist Java Image Science Toolkit
joblib
python-joblib tools to provide lightweight pipelining in Python
python3-joblib tools to provide lightweight pipelining in Python
klustakwik
klustakwik automatic sorting of the samples (spikes) into clusters
libcgroup
cgroup-bin Tools to control and monitor control groups
libcgroup-dev Development libraries to develop applications that utilize control groups
libcgroup1 Library to control and monitor control groups
libpam-cgroup PAM module to move a user session into a cgroup
libeatmydata
eatmydata library and utilities designed to disable fsync and friends
libfreenect
freenect library for accessing Kinect device -- metapackage
libfreenect-bin library for accessing Kinect device -- utilities and samples
libfreenect-demos library for accessing Kinect device -- dummy package
libfreenect-dev library for accessing Kinect device -- development files
libfreenect-doc library for accessing Kinect device -- documentation
libfreenect0.5 library for accessing Kinect device
python-freenect library for accessing Kinect device -- Python bindings
libgdf
gdf-tools IO library for the GDF -- helper tools
libgdf-dev IO library for the GDF -- development library
libgdf0 IO library for the GDF (general dataformat for biosignals)
libgdf0-dbg IO library for the GDF -- debug symbols
matlab-gdf IO library for the GDF -- Matlab interface
octave-gdf IO library for the GDF -- Octave interface
libguac
libguac-dev Development headers for the core Guacamole library
libguac3 Core Guacamole library used by guacd and client plugins
libsvm
libsvm-dev The LIBSVM header files
libsvm-java Java API to support vector machine library
libsvm-tools The LIBSVM binary tools
libsvm3 library implementing support vector machines
libsvm3-java Java API to support vector machine library
python-libsvm Python interface for support vector machine library
lipsia
lipsia analysis suite for MRI and fMRI data
lipsia-doc documentation for LIPSIA
matlab-support
matlab-support distro integration for local MATLAB installations
matlab-support-dev helpers for packages building MATLAB toolboxes
mcpanel
libmcpanel-dev Library to display multichannel data in realtime (Developement files)
libmcpanel0 Library to display multichannel data in realtime
libmcpanel0-dbg Library to display multichannel data in realtime (Debugging symbols)
mdp
python-mdp Modular toolkit for Data Processing
mipav
mipav quantitative analysis and visualization of medical images
mlpy
python-mlpy high-performance Python package for predictive modeling
python-mlpy-doc documention and examples for mlpy
python-mlpy-lib low-level implementations and bindings for mlpy
mpi4py
python-mpi4py bindings of the Message Passing Interface (MPI) standard
python-mpi4py-dbg bindings of the MPI standard -- debug symbols
python-mpi4py-doc bindings of the MPI standard -- documentation
python3-mpi4py bindings of the Message Passing Interface (MPI) standard
python3-mpi4py-dbg bindings of the MPI standard -- debug symbols
mriconvert
mriconvert medical image file conversion utility
mricron
mricron magnetic resonance image conversion, viewing and analysis
mricron-data data files for MRIcron
mricron-doc data files for MRIcron
mrtrix
mrtrix diffusion-weighted MRI white matter tractography
mrtrix-doc documentation for mrtrix
mwrap
mwrap Octave/MATLAB mex generator
netselect
netselect speed tester for choosing a fast network server
netselect-apt speed tester for choosing a fast Debian mirror
neurodebian
neurodebian neuroscience-oriented distribution - repository configuration
neurodebian-archive-keyring neuroscience-oriented distribution - GnuPG archive keys
neurodebian-desktop neuroscience-oriented distribution - desktop integration
neurodebian-dev neuroscience-oriented distribution - development tools
neurodebian-popularity-contest neuroscience-oriented distribution - popcon integration
nibabel
python-nibabel Python bindings to various neuroimaging data formats
python-nibabel-doc documentation for NiBabel
python3-nibabel Python3 bindings to various neuroimaging data formats
nifticlib
libnifti-dev IO libraries for the NIfTI-1 data format
libnifti-doc NIfTI library API documentation
libnifti2 IO libraries for the NIfTI-1 data format
nifti-bin tools shipped with the NIfTI library
nipy
python-nipy Analysis of structural and functional neuroimaging data
python-nipy-doc documentation and examples for NiPy
python-nipy-lib Analysis of structural and functional neuroimaging data
python-nipy-lib-dbg Analysis of structural and functional neuroimaging data
nipy-suite
nipy-suite Neuroimaging in Python
nipy-suite-doc Neuroimaging in Python -- documentation
nitime
python-nitime timeseries analysis for neuroscience data (nitime)
python-nitime-doc timeseries analysis for neuroscience data (nitime) -- documentation
numdiff
numdiff Compare similar files with numeric fields
odin
libodin-dev static libraries and header for ODIN sequences
mitools view, convert and perform basic maths with medical image datasets
odin develop, simulate and run magnetic resonance sequences
openmeeg
libopenmeeg-dev openmeeg library -- development files
libopenmeeg1 library for solving EEG and MEG forward and inverse problems
openmeeg-tools openmeeg library -- command line tools
python-openmeeg openmeeg library -- Python bindings
openopt
python-openopt Python module for numerical optimization
openpyxl
python-openpyxl module to read/write OpenXML xlsx/xlsm files
python3-openpyxl module to read/write OpenXML xlsx/xlsm files
opensesame
opensesame graphical experiment builder for the social sciences
packaging-tutorial
packaging-tutorial introduction to Debian packaging
parallelpython
python-pp parallel and distributed programming toolkit for Python
pprocess
python-pprocess elementary parallel programming for Python
psignifit3
python-pypsignifit psychometric analysis of psychophysics data in Python
psychopy
psychopy environment for creating psychology stimuli in Python
psychtoolbox-3
octave-psychtoolbox-3 toolbox for vision research -- Octave bindings
psychtoolbox-3-common toolbox for vision research -- arch/interpreter independent part
psychtoolbox-3-dbg toolbox for vision research -- debug symbols for binaries
psychtoolbox-3-lib toolbox for vision research -- arch-specific parts
psychtoolbox-3-nonfree
matlab-psychtoolbox-3 toolbox for vision research -- Matlab bindings
matlab-psychtoolbox-3-nonfree toolbox for vision research -- Matlab binary blobs
octave-psychtoolbox-3-nonfree toolbox for vision research -- Octave binary blobs
pycharm-community-sloppy
pycharm-community-sloppy PyCharm IDE (sloppy packaging)
pydicom
python-dicom DICOM medical file reading and writing
pyentropy
python-pyentropy Python module for estimation information theoretic quantities
pyepl
python-pyepl module for coding psychology experiments in Python
python-pyepl-common module for coding psychology experiments in Python
pyglet
python-pyglet cross-platform windowing and multimedia library
pymvpa
python-mvpa multivariate pattern analysis with Python
python-mvpa-doc documentation and examples for PyMVPA
python-mvpa-lib low-level implementations and bindings for PyMVPA
pymvpa2
python-mvpa2 multivariate pattern analysis with Python v. 2
python-mvpa2-doc documentation and examples for PyMVPA v. 2
python-mvpa2-lib low-level implementations and bindings for PyMVPA v. 2
pynifti
python-nifti Python interface to the NIfTI I/O libraries
pynn
python-pynn simulator-independent specification of neuronal network models
pyoptical
python-pyoptical python interface to the CRS 'OptiCAL' photometer
pysurfer
python-surfer visualize Freesurfer's data in Python
python-networkx
python-networkx tool to create, manipulate and study complex networks
python-networkx-doc tool to create, manipulate and study complex networks - documentation
python-neuroshare
python-neuroshare Python interface and tools for Neuroshare
python-neuroshare-doc Python interface and tools for Neuroshare
python-traits
python-traits4 Manifest typing and reactive programming for Python
python-tz
python-tz Python version of the Olson timezone database
pyxid
python-pyxid interface for Cedrus XID and StimTracker devices
pyxnat
python-pyxnat Interface to access neuroimaging data on XNAT servers
rtfilter
librtfilter-dev realtime digital filtering library (development files)
librtfilter1 realtime digital filtering library
librtfilter1-dbg realtime digital filtering library (debugging symbols)
scikit-learn
python-scikits-learn transitional compatibility package for scikits.learn -> sklearn migration
python-sklearn Python modules for machine learning and data mining
python-sklearn-doc documentation and examples for scikit-learn
python-sklearn-lib low-level implementations and bindings for scikit-learn
sigviewer
sigviewer GUI viewer for biosignals such as EEG, EMG, and ECG
simplegeneric
python-simplegeneric Simple generic functions for Python
sphinx
python-sphinx tool for producing documentation for Python projects
spm8
matlab-spm8 analysis of brain imaging data sequences for Matlab
spm8-common analysis of brain imaging data sequences
spm8-data data files for SPM8
spm8-doc manual for SPM8
stabilitycalc
stabilitycalc evaluate fMRI scanner stability
statsmodels
python-scikits.statsmodels transitional compatibility package for statsmodels migration
python-statsmodels Python module for the estimation of statistical models
python-statsmodels-doc documentation and examples for statsmodels
python-statsmodels-lib low-level implementations and bindings for statsmodels
stimfit
python-stfio Python module to read common electrophysiology file formats.
stimfit Program for viewing and analyzing electrophysiological data
stimfit-dbg Debug symbols for stimfit
svgtune
svgtune tool to generate a set of .svg files out of a single .svg file
sympy
python-sympy Computer Algebra System (CAS) in Python
testkraut
testkraut test and evaluate heterogeneous data processing pipelines
underscore
libjs-underscore JavaScript's functional programming helper library
via
libvia-dev library for volumetric image analysis
libvia-doc VIA library API documentation
libvia2 library for volumetric image analysis
via-bin tools for volumetric image analysis
vmri-nonfree
virtual-mri-nonfree Virtual Magnetic Resonance Imager
vowpal-wabbit
libvw-dev fast and scalable online machine learning algorithm - development files
libvw0 fast and scalable online machine learning algorithm - dynamic library
vowpal-wabbit fast and scalable online machine learning algorithm
vowpal-wabbit-dbg fast and scalable online machine learning algorithm - debug files
vowpal-wabbit-doc fast and scalable online machine learning algorithm - documentation
voxbo
voxbo processing, statistical analysis, and display of brain imaging data
vrpn
libvrpn-dev Virtual Reality Peripheral Network (development files)
libvrpn0 Virtual Reality Peripheral Network (client library)
libvrpnserver0 Virtual Reality Peripheral Network (server library)
vrpn Virtual Reality Peripheral Network (executables)
vrpn-dbg Virtual Reality Peripheral Network (debugging symbols)
xdffileio
libxdffileio-dev Library to read/write EEG data file formats (development files)
libxdffileio0 Library to read/write EEG data file formats
libxdffileio0-dbg Library to read/write EEG data file formats (debugging symbols)
xmhtml
xmhtml1 A Motif widget for display HTML 3.2
xmhtml1-dev A Motif widget for display HTML 3.2
xppaut
xppaut Phase Plane Plus Auto: Solves many kinds of equations
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